SelenoDB
Release 2.0
Chart Advanced
Reference

Please, if you find SelenoDB useful for your research cite:

Romagné F, Santesmasses D, White L, Sarangi GK, Mariotti M, Hübler R, Weihmann A, Parra G, Gladyshev VN, Guigó R and Castellano S
SelenoDB 2.0: annotation of selenoprotein genes in animals and their genetic diversity in humans
Nucleic Acids Res, 42, D437-D443 (2014)

Castellano S, Gladyshev VN, Guigó R and Berry MJ
SelenoDB 1.0: a database of selenoprotein genes, proteins and SECIS elements
Nucleic Acids Res, 36, D339-D343 (2008)



Some publications using our data:

Quattrone A, Dassi E
Introduction to Bioinformatics Resources for Post-transcriptional Regulation of Gene Expression
Methods in Molecular Biology, 1358, 3-28 (2016)

White L, Romagné F, Müller E, Erlebach E, Weihmann A, Parra G, Andrés AM, Castellano S.
Genetic Adaptation to Levels of Dietary Selenium in Recent Human History
Mol Biol Evol, 32, 1507-1518 (2015)

Penglase S, Hamre K, Ellingsen S
The selenium content of SEPP1 versus selenium requirements in vertebrates
PeerJ, 3, (2015)

Fredericks GJ, Hoffmann PR
Selenoprotein K and Protein Palmitoylation
Antioxidants & Redox Signaling, 23, 854-862 (2015)

Liu J, Rozovsky S
Membrane-Bound Selenoproteins
Antioxidants & Redox Signaling, 23, 795-813 (2015)

Bulteau A, Chavatte L
Update on Selenoprotein Biosynthesis
Antioxidants & Redox Signaling, 23, 775-795 (2015)

Koehrle J
Selenium and the thyroid
Current Opinion in Endocrinology, Diabetes & Obesity, 20, 441-448 (2013)

Kossinova O, Malygin A, Krol A, Karpova G
A novel insight into the mechanism of mammalian selenoprotein synthesis
RNA, 19, 1147-1158 (2013)

Chen XS and Brown CM
Computational identification of new structured cis-regulatory elements in the 3'-untranslated region of human protein coding genes
Nucleic Acids Res., 40, 8862-8873 (2012)

van Ommen B, El-Sohemy A, Hesketh J, Kaput J, Fenech M, Evelo CT, McArdle HJ, Bouwman J, Lietz G, Mathers JC, Fairweather-Tait S et al.
The Micronutrient Genomics Project: a community-driven knowledge base for micronutrient research
Genes & nutrition, 5, 285-296 (2010)

Allmang C, Wurth L and Krol A
The selenium to selenoprotein pathway in eukaryotes: More molecular partners than anticipated
Biochim Biophys Acta, 1790, 1415-1423 (2009)

Latreche L, Jean-Jean O, Driscoll DM and Chavatte L
Novel structural determinants in human SECIS elements modulate the translational recoding of UGA
as selenocysteine

Nucleic Acids Res, 37, 5868-5880 (2009)

Castellano S
On the unique function of selenocysteine - Insights from the evolution of selenoproteins
Biochim Biophys Acta, 1790, 1463-1470 (2009)

Cornman RS, Chen YP, Schatz MC, Street C, Zhao Y, Desany B, Egholm M, Hutchison S, Pettis JS,
Lipkin WI and Evans JD
Genomic Analyses of the Microsporidian Nosema ceranae, an Emergent Pathogen of Honey Bees
PLoS Pathog, 5, e1000466 (2009)

Castellano S, Andres AM, Bosch E, Bayes M, Guigó R and Clark AG
Low exchangeability of selenocysteine, the 21st amino acid, in vertebrate proteins
Mol Biol Evol, 26, 2031-2040 (2009)

Harrison P and Yu Z
Frame disruptions in human mRNA transcripts, and their relationship with splicing and protein structures
BMC Genomics, 8, 371 (2007)

Chart Advanced