SelenoDB
Release 2.0
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Transcript Report for SPT00002876_2.0
Identity
TranscriptSelenoprotein M (SELENOM)
SpeciesXenopus tropicalis (Xenopus)
Transcript IDSPT00002876
Transcript release2.0
External IDNone
Gene SPG00002784_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Full length Spliced 5UTR CDS 3UTR
 
Sequence
>SPT00002876_2.0 # Transcript # Selenoprotein M (SELENOM) # Xenopus 
ATGTGGCGACCGCTGCTGCTGCTGGGCCTCCTCCAGCCCATCCTGGGCTATCAGATCGAC
TGGAACAAGTTGGACAGGATCGCCAGGGGTAAAGTTGAGGTAAGGAGGGCCCTTAGTTAA
CTGCACAGGGGCCATGAAGCAGACGGAATGTACAGAATATATATATATATACACGTTCTG
GTTTTCAAAAACACACTGCATTGCTAATTATAATTGATAGTTTATACATAATACAAATAT
TTCTGCCATACAAAAATATTACTGGTAATTAACAAAAGGACTTATCGATAGACTTGAGGC
ACTTATTAACAGCTGTTAGTGTATTGCCAGCCATTGTGCCTATCATATCTGCCTAACTGA
TATTCCTGTTTCTCTTCACAGTCCTGTGGGGGATGACAGCTGAACAGGCTGAAAGAGGTA
AGTACCTTTTCCGAATTCAATAGGGATAACTCTTTATAACTCTTTATAGGGGAGGGGGTT
CTGCTTCTGAGTTTTGGCACAATTAGAAAGCTACAAATATCTACTAAATTGTGTGATCTG
GGTATGTTTTAAGTAGGGAAACAGAGAGAAAAGAAATACATGAGGCAGGGAAAGCTGTGG
GCACAAAACCATGTAGCGGGACAGGTTTGGCCAGTGCTGCCGTCAGTCTTTTCAATGAAA
GGTAAAATTCGTCAAACTGTCTGTTTAGACCCCCCAGATCTCTAAATATGGTGCTGCAGA
TGCTGTTGCACTTACAGTCCAGTATCCTGATGGTCCCAAGTGAGTTGCTTAGGAGGACCC
ATCACTTTGCTAAACATATAGTAACAGTAAAAACGTACATCAGTTAATATACAATCTCTA
TAGAACTATAACCAGAGTTAATTCATATATGCAGGAAACAGGTTGGCACAGACAGTCCCT
GCTAAATGCATTATTACTACAGTGCCCAGGTTATCAGGTCTTGTATTACCTCAGTGACAG
AATGCAAACTTAAATTTGACTTTGCAATTAGAGAATTCACAACAGAAGTGCAGACTTACA
GAGCAGTGGTAACCCATAGCAACCTAACAGTTACATCAAACTACTTGGTTGCCATTGGTT
TTTATTCCAGAATAAAACTGCACCTGTTTTATTAATTCCCCCCAGAGAGTGACTCAGCCA
ATGGCTGCTGCTGTGACAAACAGGCAGGCTATGAACAGCTCTCTAATCACTACCTTTGAG
ATAACTTATTATATCCATCATGGGTTCTCAGAATCACTCCCTGCGCATCTGTAAATAAAG
TTAAAGGGAAAATATACCCCCTTTTAGACATGAGCTCATTTAGTTGGGGTTATGCAGAAA
ATGTACATAAACACGATCTAAGCTTCCAGATATAAATATAAATGTGTTTTGTTTTACACA
AACAAGTTGATTCCACAGATTGAAGGATGCCGTTATAATTCTAATAAGCTGTATCCCAAG
ATTTTTTTTCAATGAAAAGTGAATTCTGGGACATGAAGCACATTTGCTTTCCATAGCTGG
AAACACAGATTCTTCAGAAAGCAGAGGGACTTCCAAGTCCCAGAATCCATCACTTCACAA
TGCAACAAGATAAGGGTGGGGTTGCATTACAGTGAGACTCTAGGGAGCAATTGCTTACAA
GCATGGTAACCCCATCCATTAAGCTTCTATCTTATGCTACTGCTCAAAAAGAACAGTTAT
AACAATGCTGTTTAGTCACGGATGTACTTTTCTTATCAACCTGTTGTCTATTCCAGGTGA
AGGCCTTTGTCACAGATGACCTCCCTCTTTAGTATCCTTTTATAACATTTGGTTACAGTG
GTTATTGACACCCCAAACTAAGGATCTAACAATATTTTAGGGTGAAGACACACAGAGCTA
CTAGTACTACTGATCATTTACTGATAATTGTCTCTACGTGTGTGTAAAACGCAGGTTGGA
TGGCATACGCGTTGCTTCGGTTTGCCCAAGTCATCCAAAGTTGCCTCTTAATGAAACTTC
GGACTTCGGAAAACCAAAGCAATGCGTATGCCATCCCACTGGTGATTTACATTCTTGCCG
GTGGGATGGCATTTCAGGGAGATTAGTCACCCGCAATAGCAAAGATTTATCACGGGCAAC
TTATCTCCCTGTGTGACGCTGCCCAACCAGGTTGTCTAATTCCATTGTATTGTATCAGGA
AATATGCTTCTTAAAGGAACAGTAACACCACAAAATGAAAGAGCTTTAAAGTAATAAAAA
TATAATGCACTGTTGCCCTGCACTGGTAAAACTAGTGTGTTTGCTACAGTAACCCTACTA
TAATTTATATAATAAGCTGCTGTGTAGCCACGGNGGCAGCCATTCAAGCTGGAAAAAAGG
AGAAAAGGCACATGTTACATAGCAGATAACAGATAAGCTCTGTAGAATACAATAGTGTTT
TATCTGTTATCTGCTATGTGCCTGTGCCTTTTCTCCTTTGAATGGCTGCCCCCATGGCTA
CATAGCAGCTTATTTATATAAATTATAGTAGACTTTCTGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTT
GCAGAGCTACTTTGCCAGCATTTATGGTGTATTTTTACCACTTATAGCACATATTTACCC
TACGAGGTAACATAATTTAATTCCATTTATGAAACACATACTAAGGAGCAGATTTGATAT
GTTGTTTAGTCCTTGACCCATGGCAGTCATAACCTTGAGATGAAACACATTCCTGGTGCG
GACCCTGAACTTGTACTGATTACATCCAAATATGAAGAACTTGAGGTAAGAGGATCGGAA
TAGAAAATGCTTTAACTCTCAGTCAGGGTCATTTATAAACACTGGGCAAAATTGCCCATG
CTCAGTAACCCATAGCAACCAAGAGGCTTGAGAAAGGGCTGGAACCCGAAATGTTGCCTG
TTCTGTTGGCATAATAAAAACACCTTTTTCACTTGATTCGGAGTGCTACAGTGTGTTGTA
TTACAAAGTTCCATTTGGTCCTTGGCAGTGGGCTCAGCTGACAGCACCCAACGCTACAAG
TGGTTGTTACAGGTGAGTATTACCAATTTGCATTTGGACCATAGCAACCAATCAGTGATT
GCTATTTTTCAGCCAGCTCCAGGTTGAATAATAAAATCACATATTTGATTGCCATGGGTT
ACTGCTGAGGTGCACATTTGCACTATTCCTGCAATATAGAATTGTTCATTCATATCTTCA
TCTGTTTATGTTGGTGTTTTGACACATTAAATGCTGCAAGTGCATGAGAATTCCTATAGA
GGGTGGCCTGATTTACCAGGAATGAGAGATTATCATTGAGAAGCGTTTGTGTGCTATGAA
GCTTAAATGCAATTATCTCCCAGTAAGGAAACATATCTGTGCCAGAGACTGAGATATCCA
GTGCAGCACATCATACATAGATTGCGATTACCAAATGCCTCGCGAGGCAACTTCGGCGAT
TTGCCGAAATCGCCTGCGCAGCGTGTGCCATCCCACCGGCGACTTACATTTTTGCCGGTG
GGATGGCAGTTCGGGGAGATTAGTCGCCCATGACAAGGGAGATTTGTCGCGGGCGACTAA
TCTCCCTGTGTGCCAGAGCCCTAAGTGTTTCAGGGCATTTTCATTTAAGCCTCCTTCTAA
GGTTTCATCTTGTCTGTTCTAATACAAAGGGTTAAGACTGCACAGCTACTAGAAGCACCA
ACCATAGGATGATGGTAAACAAATTTCAAAGCCAGTTTAAGTAAACCCCATTTGCTTTCT
CCGTCTCCTGAGAAAATATAATTACTAAATTACTGTCACAAACAACATAATGCATGCGTG
TGTGTTCAGGTGTGTGATGTCAGGCTGTGCCCCAGGATAGCTTCTTCCAGCTATGGATCA
GCTCCAGGCAATATGACACTTTGCTTTTTAAGTGGCCTCCCAGGGTTTGATTTTCAGATT
TTCAGTGAAGGAGTCTCGGTAGAACTTTTTTCTAACAGTGGGTAGATTTGCACCAGTGCA
ATAAGTAACTATTCAGATAATTGCTAAGTGTCTACCCTAAGTTGCCCGTGTGTGCCATAC
TCTGCCTTCCCTAAGTTGCCCGCGTGTGCCATACTCTGCCTTCCCTAAGTTGCCTGTGTC
TGCCATACTCTGCCTTCCCTAAGTTGCCTGTGTGTGCCACACTCTACCTTCCCTAAGTTG
CCTGTGCACCATACTCTGCCTGCGTCTGCTATACATTTCCTACCCTATGCTGCCTGTATG
TATCATACTCAGAAGCGCCCCAGTTACCAGGGGCGGCAAAAAGCCGCTCCTGGTAACTTT
AAGAGCCAAATTTCCAAATAGTGGCAATTGCGCTCTCTGCACTAGCGATCTCACCGCCCC
CGGACCCGCTCCTACGCTCAGAAGGTAAGCGCTGGGGAGCTGGGGGGCGGCATCCAGGAG
CCGCCTCAGGTGGCGATATGTCCAGAATCGCCCCTGATCATACTTAGCCTGCCTTATACT
ACCTGTGTGTGGGGGTTTGTTCTAGGAGTTTATCTTTTGGAAATAGTTGGTAGGGGGTCC
TTAAAGTGTGTATGTGCTGGGGGCTGCTGTGCTATACACAGGGGGAGGAGCCATATGTAT
TTAAGAGTGTGGCTTAATATAACTTATGAGGGAAGGGTGATATCCCGGCAGTGAGTATAA
TGATTTCATTTTTTGGTGTGCTTTCACCATTAATATGGGTATGGTTTTAAAAGCTCTTGT
GATAATATGGGTGTGGGCATAGTCAAAAATGGCTTCCATTATCGCCCCCCCACAACATAG
GCCAGACAAATTCCATCCCTCAGTACCACAGAAGTTGAACACTGCTCTAGGAGATAAAGT
TGGAAGAAACTCACTGGCTAGTGTAAGTGGTCCAGGTGTGTATGCCCTGAACCCATGGCA
TTAAGTAAAATCATATCAACGACCAACTTTTTCAGACAGTTGCACTCTGGACAGGAGGTT
AAAACTCTAATTTCTAATCCATTAAAAGAAAAAAAAAAAAAAAAAAGTCACCTGCCACAT
TTATTGCGTTCTGCGTTTATATTCCTATTCACTATATTCTATGTAAACAATTTAGATATT
TTCAACACTACCGATACATGAATAATGTTCAATTCTTATTTCATTTCTCTGGATCACTAT
CCTGGCCCAGGTCCTGCCCCACTAAGGCAACTCCTTATTCAGGATCTCTGACAGGCTTAT
TAGTAACATTATATGCTGGGGAGAGATTCTCTGGCACATGGATATTTCAGGCACATAGTT
TCCAAGGTTGTGTTTTCTATTTTAGAGCAGGTAATTGTTATGTAGCGTGTGACTTAGGAT
GTCCCCCTCAGGGGTGCTGGTTGCTTTTACATATAGAAATCATCTCATTTTCTTTAATAA
AGTGGGTTTCCGACAATGTGCTTAGCAGTTAGTGCTAGATAATTGTTTATTTATTTTTAA
TAGCATGGTGAGATGGATATATTTATATATAAGTAAAATAAACTCTGAGATTTAATGTCT
CACCATACTATAAAAATGAGTTTATCACTAACAGATAATCTTCAGGTTTTTAGCAGAAGT
AGCAGAAAACCATTATCCCTGTTTGATAGAAGCTTGCTTGGAGGCATGTTCCAAGTGAAA
GAAATGATTTTGCATGTTCTGTCATTCTAGCGAATCCCACTCCGTGACATGAAGAGAAGT
GAAATTATACAGCTGCTGAAAGACCTGGGGTTTTATAGGAAAAGCAGCCCTGATGCTCTA
GTTCCTGCTGAGTTCAAGATGGCACCTGCAAGGGCATCAGGGGACAAAAAGGAAGACTTG
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