SelenoDB
Release 2.0
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Transcript Report for SPT00001762_2.0
Identity
TranscriptSelenoprotein I (SELENOI)
SpeciesOchotona princeps (Pika)
Transcript IDSPT00001762
Transcript release2.0
External IDNone
Gene SPG00001667_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Full length Spliced 5UTR CDS 3UTR
 
Sequence
>SPT00001762_2.0 # Transcript # Selenoprotein I (SELENOI) # Pika 
TTGATTTGTTTTTGCAGAAGCTATAAAAATAACACCTTGAAACACAATTCCGTCTATGAA
GCTATGATTCCCTTCTTTTCTCCATGTTTGCTGTTCATTTTGTCTACAGTATGGATCCTC
CGGTCACCTTCGGACATTTTAGAGCTGCATCCTAGAATTTTCTACTTTATGGTTGGAACA
GCCTTTGCTAATATCACAGTAAGAATTTTTTTTTTAAAAAAAGCTTTATGTATATTTAGT
TGGAAGGTGGTGGTGGGGACAGATAGATTAAGAGACCTTCATATGCTGGTTCACTCTCCA
AATGCCCACAACAGCCGAAGGTGGGTCACACTGAAGTTGGGAGCCAGTAACTGCATCTGT
TTCTCCCGCATGGGTGGCAGGGACCCCAGAAGTGCAGGCATCACCTGCTGCCTCCCAGAG
TGCATATTGGCAGGAGCTGGGTTGGCAGCAGATGTGGGGCTCGGGCTCAAGCACGTGATA
GAGGTCCCAAGTGGAGACCTAACCAGCCGCTCAGTGTCTGCCACATTTTTAAAAAATCAT
AATATATGTAGTATATGATGGGATTTGATAATTTAAGAGATTTTTTAAAAAGATTATTTT
TTTAGTGGGGCAAATTTTTATTAACATGTGGCATTCATGCTTTTAATATGAAAGGAAACT
GAGGTGTCAAATCCCAGAAATGGGACAAGTTCCACCAACCAGAACTCAAACACCATACTA
TAACCTAATTATAAGAAATGCTAGTTGAAATGCTAAGAGAAATACTAAACACATCAGTTA
TCTATTGTTTAAAATTTGAAAGAGAATAAAGATTCAAACGGTAAAAATGAAATAGAAAGA
ATACCCCCATGATAAGGTAAGAGTGGTCAATGTTACTGAGTTGCTATAACAGAGATGATT
CCATGTGTCCAACAACCATTTGTCTGATCTTATGGGCATTCTGGAAAACCAGGTGAACTA
GCATTTCTTATAAAAAGATTATTTATTTTTATTGGAAAGTCAGATTTGTAGAGAGAAGGA
CAGACAGATTTTCTATCTGCTGCTTTACTGCCGAAGTGCCCACCGTAGCTGGAGCTGAGC
TGCTCTGAAGCCAGAAGCCAGGAGCTTCTTCCAGGTCTCCCATGAAGGTGCAGGGTTCCA
AGGCCTGGTCTGTCTTTGACTGCTTTCGCAGGCCACAAGAAGGCAGCTGGATGAGAAGTG
GGGCTGCCGGGATTAGAACTGGCATTCATACGGGGTTCTGGTGCATTCAAGGTGAGGACT
TTAGCTGCTAAGCCATTGCGCTGGACCCAACATACTCAGTTTTTAAAACTCAGCTACTTT
TAAAATTGAGAACATTGGATAAAAAAAAAAAAAGCTATATAAAGGGTATTACTGAAAGAA
TAAAGCAGTTGGAGGAAGATACTGGAAATAGATTTTGAGGTGTTATTTATTTGAGTTGTT
GGAGAGGTCTCTGGCTGGGCTAGATCCTGGTTCCTGTCTCCAGGAGGAAGTCTTCAAAGA
GGAGACAAGGATAAAAGAATGGCAGGAAAGCAAGATTTATTTAAGGGAAAGTACACACCT
AGAAGGGAGTGTAGGCAACTTCCTAGGAGAATGATGCAACAAAGTTTTGGGTTGTCCTTA
TAAGAATGCTATCTGAGGGAGGGCCTGATGAAATGTTCAAAGAAGGCAGTTTTGGGTGAA
ACTTGAGTAATGTCCATTTCCCTGCCCCCTTTTTACATGATGGAAAGGGGAGTGTCACTC
ATGATTTCATTACTATAGGCACCCAGCCTGCAGCCATGGTGGATATTTCTAGCTGGTACC
TCCCTGGTAGCTGCATGCACAGGGTGGGGTGAGATGTGGGTGGTTGGAAGTCCTCCATCC
CTCCCTGCTGGTGGCCTTCCTGCCTGCACCAATATGACTACATTTGAGATGGGACGTTCC
TAATCATTCCTGTAGAGAAATTTACTTGTGTGTAGCTGTGGGAGGCCATTTTGGAAAATG
TTATTCCCGTTTATCATTAAGAATGCCTTATTTAACAGCTTTAGTGAATTTTCTTCTGGC
CTCTTCTGAGATACACTCAGGGTTCATGAGTTTTGGTGTGGGGTGGAGGCTCAATCACCC
ACACAGTTGCACTTGAGAGCTTCTAAGCTTAGATGATATGGAAGTGTTGGCTCAAGTGCT
TGAATGCCTTTCAAATGAGTAATTAATTGTGGAAGTGCACTGCTAATTAAACATTTCTTT
CCTTCTTTTAACTAACTTCAAGTGTCAGCTGATTGTTTGTCAAATGAGCAGTACCCGTTG
CCCAACTTTGAACTGGTTGCTGATTCCTCTCTTCTTGGTTGTCATGGCAGTAAACTTAGG
AGTAGCCTCTCACATCGAGAGCATTCTCCTGTATACATTAACAACTACCTTCACTCTGGC
CCACATCCATTATGGAGTACGCGTGGTGAGTACTTTGGGGGAGATTGGTGCCATTTGGTT
CTTAAAAAAAAGTGGAAAGGAGACATTAGAAAATTCAAAAGAGTTGTCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAAGTCTA
AATTTATACTGTTTCATCAGGATTAGAAATGATTACCAAGAAATGTTTTGATAAGATCAG
CACTGAATCGAAGTGTAGTTGAAACTATTTACTCTGTTAGATATCTTAAGTCAACTAGAA
CATTTCGCTTGATTTAGATGTTCATTTGTTTCATCTAGATGGACCTGGAATGACTAGATT
TTGGGGTTAGACAGGTCCAGGTTCAAGTCCTAATTCTTAGTATGGTTCCAGTTCTTTCTG
TTCAGCTATCTAACTCTCTTTAGAAATCTTAAATTAGAAAAAAACTTTTTTGGGGGGTAA
GACAGGCAGGCCTTGTCAGCAAATCATTATCTTGCAAGGAATTCTGTGTGCTTTAAAGAT
TTATTTTTATTGAGTAATCAGATATACAGAGTGAAGGAGATACAGAGAGAAAGATGTTCC
ATCCACTGGTTCACTCCCTATGTGGCTGCGATGGCAGGCACTAAGCCGATCTGAAGCCAG
GAGCCTGGATTTCCCACATGGATGCAGGGTCCCAAGGCCTTGAGCCCTGCTTTACTGCTT
TCCTAGGCCACAAGCAGCGACTGGAAGGGAAGTGGAACAGCCGGGTCACAAACTGGTGCC
CATATGGGATCCCAGCACACACAAGGCAATGATTTATCTACTAGGTTACCGCACTGGGCC
CTCTGTATGTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTAATTATTCACTTACTTGAAAG
GCAGAGTGATAGAGTTTGAGGGGTGAAAGAGATCGTCAGTCTGCTGGTTCACTCCCCAAA
TGGCTACAACTGAAGCTAGGCCGGGCTGAAGCAAGGCACTCAGAACTCCATCTAGACCGC
CCACCTGAGTGGCAGGAGCCCCAGGACTTGAGCCATCCTCTGCTGCTTCCCAGGATGCAT
TAGGAGAAAGCTGAATTGGCAGCTCAGTTGCTGGGACTTGAACTGGCAGGTTGATATGGG
ATGTGGGCATCCCAAGTGGCAGCTGAATGTGCTGCATCACAATGTCCACCTGCTCTGTGC
ACTTTGAAACGAATAATAGAACGTGTTTGGTTTAGTAGATAAACTATCTGTTGGGATGCT
CTGTTTGAGTTCTGGCTCCCCTCGATCACTCTGTATGCAGACCCTGGGAGCAGCTGCAGT
GGCTAGTAATGGTTCTAGTACCCTGTGAAGACTCCTGATCCTCCTGCTGTATGGCATCTT
TGTCCCTCTCTTTAAATAATAATTAAACAAATGCAAACAGTTTAAAAAGGAACATATTGT
CACTGTCTGCTGTTCTGATTTTCCATAGGTGAAGCAGCTGAGCAGTCATTTTCAGATTTA
CCCTTTCTCCTTGAGGAAACCAAACTCAGATTGACTAGGAATGGAAGCAAAGAACATTGT
CGTG
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